Sherrill-Mix, S: search on Z-Library

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1

Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA

Kelly, Brendan J., Gross, Robert, Bittinger, Kyle, Sherrill-Mix, Scott, Lewis, James D., Collman, Ronald G., Bushman, Frederic D., Li, Hongzhe

Journal:

Year:

2015

Language:

english

File:

PDF, 581 KB

english, 2015

2

Optimizing methods and dodging pitfalls in microbiome research

Kim, Dorothy, Hofstaedter, Casey E., Zhao, Chunyu, Mattei, Lisa, Tanes, Ceylan, Clarke, Erik, Lauder, Abigail, Sherrill-Mix, Scott, Chehoud, Christel, Kelsen, Judith, Conrad, Máire, Collman, Ronald G.

Journal:

Year:

2017

Language:

english

File:

PDF, 767 KB

english, 2017

3

A tool kit for quantifying eukaryotic rRNA gene sequences from human microbiome samples

Serena Dollive, Gregory L Peterfreund, Scott Sherrill-Mix, Kyle Bittinger, Rohini Sinha, Christian Hoffmann, Christopher S Nabel, David A Hill, David Artis, Michael A Bachman, Rebecca Custers-Allen, S

Journal:

Year:

2012

Language:

english

File:

PDF, 455 KB

english, 2012

4

The stepwise assembly of the neonatal virome is modulated by breastfeeding

Liang, Guanxiang, Zhao, Chunyu, Zhang, Huanjia, Mattei, Lisa, Sherrill-Mix, Scott, Bittinger, Kyle, Kessler, Lyanna R., Wu, Gary D., Baldassano, Robert N., DeRusso, Patricia, Ford, Eileen, Elovitz, Mi

Journal:

Year:

2020

File:

PDF, 3.77 MB

2020

5

Saving endangered whales at no cost

Ransom A. Myers, Stephanie A. Boudreau, Robert D. Kenney, Michael J. Moore, Andrew A. Rosenberg, Scott A. Sherrill-Mix, Boris Worm

Journal:

Current Biology

Year:

2007

Language:

english

File:

PDF, 332 KB

english, 2007

6

CD4 receptor diversity in chimpanzees protects against SIV infection

Bibollet-Ruche, Frederic, Russell, Ronnie M., Liu, Weimin, Stewart-Jones, Guillaume B. E., Sherrill-Mix, Scott, Li, Yingying, Learn, Gerald H., Smith, Andrew G., Gondim, Marcos V. P., Plenderleith, Li

Journal:

Proceedings of the National Academy of Sciences

Year:

2019

File:

PDF, 2.21 MB

2019

7

HIV Sequence Variation Associated With env Antisense Adoptive T-cell Therapy in the hNSG Mouse Model

Mukherjee, Rithun, Plesa, Gabriela, Sherrill-Mix, Scott, Richardson, Max W, Riley, James L, Bushman, Frederic D

Journal:

Molecular Therapy

Year:

2010

Language:

english

File:

PDF, 364 KB

english, 2010

8

Allometry and Ecology of the Bilaterian Gut Microbiome

Sherrill-Mix, Scott, McCormick, Kevin, Lauder, Abigail, Bailey, Aubrey, Zimmerman, Laurie, Li, Yingying, Django, Jean-Bosco N., Bertolani, Paco, Colin, Christelle, Hart, John A., Hart, Terese B., Geor

Journal:

Year:

2018

Language:

english

File:

PDF, 3.41 MB

english, 2018

9

HIV latency and integration site placement in five cell-based models

Sherrill-Mix, Scott, Lewinski, Mary K, Famiglietti, Marylinda, Bosque, Alberto, Malani, Nirav, Ocwieja, Karen E, Berry, Charles C, Looney, David, Shan, Liang, Agosto, Luis M, Pace, Matthew J, Silician

Journal:

Year:

2013

Language:

english

File:

PDF, 1011 KB

english, 2013

10

Engineering HIV-Resistant Human CD4+ T Cells with CXCR4-Specific Zinc-Finger Nucleases

Wilen, Craig B., Wang, Jianbin, Tilton, John C., Miller, Jeffrey C., Kim, Kenneth A., Rebar, Edward J., Sherrill-Mix, Scott A., Patro, Sean C., Secreto, Anthony J., Jordan, Andrea P. O., Lee, Gary, Ka

Journal:

Year:

2011

Language:

english

File:

PDF, 1.32 MB

english, 2011

11

HIV-1 latent reservoir size and diversity are stable following brief treatment interruption

Salantes, D. Brenda, Zheng, Yu, Mampe, Felicity, Srivastava, Tuhina, Beg, Subul, Lai, Jun, Li, Jonathan Z., Tressler, Randall L., Koup, Richard A., Hoxie, James, Abdel-Mohsen, Mohamed, Sherrill-Mix, S

Journal:

The Journal of clinical investigation

Year:

2018

Language:

english

File:

PDF, 2.79 MB

english, 2018

12

U1 snRNP Determines mRNA Length and Regulates Isoform Expression

Michael G. Berg, Larry N. Singh, Ihab Younis, Qiang Liu, Anna Maria Pinto, Daisuke Kaida, Zhenxi Zhang, Sungchan Cho, Scott Sherrill-Mix, Lili Wan, Gideon Dreyfuss

Journal:

Year:

2012

Language:

english

File:

PDF, 1.74 MB

english, 2012

13

Resistance to type 1 interferons is a major determinant of HIV-1 transmission fitness

Iyer, Shilpa S., Bibollet-Ruche, Frederic, Sherrill-Mix, Scott, Learn, Gerald H., Plenderleith, Lindsey, Smith, Andrew G., Barbian, Hannah J., Russell, Ronnie M., Gondim, Marcos V. P., Bahari, Catheri

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 1.30 MB

english, 2017

14

Canadian waters provide critical foraging habitat for leatherback sea turtles

Michael C. James, Scott A. Sherrill-Mix, Kathleen Martin, Ransom A. Myers

Journal:

Biological Conservation

Year:

2006

Language:

english

File:

PDF, 741 KB

english, 2006

15

A cone-beam computed tomographic evaluation of alveolar bone dimensional changes and the periodontal limits of mandibular incisor advancement in skeletal Class II patients

Matsumoto, Kensuke, Sherrill-Mix, Scott, Boucher, Normand, Tanna, Nipul

Journal:

The Angle Orthodontist

Year:

2020

File:

PDF, 272 KB

2020

16

HIV Sequence Variation Associated With env Antisense Adoptive T-cell Therapy in the hNSG Mouse Model

Mukherjee, Rithun, Plesa, Gabriela, Sherrill-Mix, Scott, Richardson, Max W, Riley, James L, Bushman, Frederic D

Journal:

Molecular Therapy

Year:

2010

File:

PDF, 364 KB

2010

17

A summary of the fifth annual Virology Education HIV Microbiome workshop

Sherrill-Mix, Scott, Connors, Kaleigh, Aldrovandi, Grace M, Brenchley, Jason, Boucher, Charles, Bushman, Frederic, Collman, Ronald, Dandekar, Satya, Klatt, Nichole R, Lagenaur, Laurel A., Paredes, Rog

Journal:

AIDS Research and Human Retroviruses

Year:

2020

File:

PDF, 758 KB

2020

18

Hepatitis C Virus Transmission Bottlenecks Analyzed by Deep Sequencing

Wang, G. P., Sherrill-Mix, S. A., Chang, K. M., Quince, C., Bushman, F. D.

Journal:

Journal of Virology

Year:

2010

Language:

english

File:

PDF, 3.08 MB

english, 2010

19

Associations of the vaginal microbiota with HIV infection, bacterial vaginosis, and demographic factors

Chehoud, Christel, Stieh, Daniel J., Bailey, Aubrey G., Laughlin, Alice L., Allen, Shannon A., McCotter, Kerrie L., Sherrill-Mix, Scott A., Hope, Thomas J., Bushman, Frederic D.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.08 MB

english, 2017

20

Covalent Modification of Bacteriophage T4 DNA Inhibits CRISPR-Cas9

Bryson, Alexandra L., Hwang, Young, Sherrill-Mix, Scott, Wu, Gary D., Lewis, James D., Black, Lindsay, Clark, Tyson A., Bushman, Frederic D.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.47 MB

english, 2015

21

NIH Public Access

Hildebrandt, Marie A, Hoffman, Christian, Sherrill-mix, Scott A, Keilbaugh, Sue A, Chen, Ying-yu, Knight, Rob, Ahima, Rexford S, Bushman, Frederic, Wu, D

Year:

2010

Language:

english

File:

PDF, 1.14 MB

english, 2010

22

A Reverse Transcription Loop-Mediated Isothermal Amplification Assay Optimized to Detect Multiple HIV Subtypes

Ocwieja, Karen E., Sherrill-Mix, Scott, Liu, Changchun, Song, Jinzhao, Bau, Haim, Bushman, Frederic D., Inacio, Joao

Journal:

Year:

2015

Language:

english

File:

PDF, 1.10 MB

english, 2015

23

Phylogeography and Molecular Epidemiology of an Epidemic Strain of Dengue Virus Type 1 in Sri Lanka

Ocwieja, K. E., Fernando, A. N., Sherrill-Mix, S., Sundararaman, S. A., Tennekoon, R. N., Tippalagama, R., Krishnananthasivam, S., Premawansa, G., Premawansa, S., De Silva, A. D.

Journal:

American Journal of Tropical Medicine and Hygiene

Year:

2014

Language:

english

File:

PDF, 1.39 MB

english, 2014

24

Plasmodium falciparum-like parasites infecting wild apes in southern Cameroon do not represent a recurrent source of human malaria

Sundararaman, S. A., Liu, W., Keele, B. F., Learn, G. H., Bittinger, K., Mouacha, F., Ahuka-Mundeke, S., Manske, M., Sherrill-Mix, S., Li, Y., Malenke, J. A., Delaporte, E., Laurent, C., Mpoudi Ngole,

Journal:

Proceedings of the National Academy of Sciences

Year:

2013

Language:

english

File:

PDF, 803 KB

english, 2013

25

Virus structures constrain transmission modes

Bushman, Frederic D., McCormick, Kevin, Sherrill-Mix, Scott

Journal:

Nature Microbiology

Year:

2019

Language:

english

File:

PDF, 941 KB

english, 2019

26

Migration cues and timing in leatherback sea turtles

Sherrill-Mix, S. A., James, M. C., Myers, R. A.

Journal:

Behavioral Ecology

Year:

2007

Language:

english

File:

PDF, 291 KB

english, 2007

27

Comparison of placenta samples with contamination controls does not provide evidence for a distinct placenta microbiota

Abigail P. Lauder,Aoife M. Roche,Scott Sherrill-Mix,Aubrey Bailey…

Journal:

Year:

2016

Language:

english

File:

PDF, 1.83 MB

english, 2016

28

Lack of detection of a human placenta microbiome in samples from preterm and term deliveries

Leiby, Jacob S., McCormick, Kevin, Sherrill-Mix, Scott, Clarke, Erik L., Kessler, Lyanna R., Taylor, Louis J., Hofstaedter, Casey E., Roche, Aoife M., Mattei, Lisa M., Bittinger, Kyle, Elovitz, Michal

Journal:

Year:

2018

Language:

english

File:

PDF, 712 KB

english, 2018

29

[IEEE International Conference on Semantic Computing (ICSC 2007) - Irvine, CA, USA (2007.09.17-2007.09.19)] International Conference on Semantic Computing (ICSC 2007) - Perceptual Shape-Based Natural Image Representation and Retrieval

Zheng, Xiaofen, Sherrill-Mix, Scott A., Gao, Qigang

Year:

2007

Language:

english

File:

PDF, 1.39 MB

english, 2007

30

Wild bonobos host geographically restricted malaria parasites including a putative new Laverania species

Liu, Weimin, Sherrill-Mix, Scott, Learn, Gerald H., Scully, Erik J., Li, Yingying, Avitto, Alexa N., Loy, Dorothy E., Lauder, Abigail P., Sundararaman, Sesh A., Plenderleith, Lindsey J., Ndjango, Jean

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 1.52 MB

english, 2017

31

Single-cell transcriptional landscapes reveal HIV-1âdriven aberrant host gene transcription as a potential therapeutic target

Liu, Runxia, Yeh, Yang-Hui Jimmy, Varabyou, Ales, Collora, Jack A., Sherrill-Mix, Scott, Talbot, C. Conover, Mehta, Sameet, Albrecht, Kristen, Hao, Haiping, Zhang, Hao, Pollack, Ross A., Beg, Subul A.

Journal:

Science Translational Medicine

Year:

2020

File:

PDF, 2.01 MB

2020

32

[IEEE International Conference on Semantic Computing (ICSC 2007) - Irvine, CA, USA (2007.09.17-2007.09.19)] International Conference on Semantic Computing (ICSC 2007) - Perceptual Shape-Based Natural Image Representation and Retrieval

Zheng, Xiaofen, Sherrill-Mix, Scott A., Gao, Qigang

Year:

2007

Language:

english

File:

PDF, 1.39 MB

english, 2007

33

CpG Frequency in the 5â² Third of the env Gene Determines Sensitivity of Primary HIV-1 Strains to the Zinc-Finger Antiviral Protein

Kmiec, Dorota, Nchioua, Rayhane, Sherrill-Mix, Scott, StÃ¼rzel, Christina M., Heusinger, Elena, Braun, Elisabeth, Gondim, Marcos V. P., Hotter, Dominik, Sparrer, Konstantin M. J., Hahn, Beatrice H., S

Journal:

Year:

2020

Language:

english

File:

PDF, 5.45 MB

english, 2020

34

Dynamic regulation of HIV-1 mRNA populations analyzed by single-molecule enrichment and long-read sequencing

Ocwieja, K. E., Sherrill-Mix, S., Mukherjee, R., Custers-Allen, R., David, P., Brown, M., Wang, S., Link, D. R., Olson, J., Travers, K., Schadt, E., Bushman, F. D.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 1.72 MB

english, 2012

35

Gene activity in primary T cells infected with HIV89.6: intron retention and induction of genomic repeats

Sherrill-Mix, Scott, Ocwieja, Karen E., Bushman, Frederic D.

Journal:

Year:

2015

Language:

english

File:

PDF, 2.03 MB

english, 2015

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